Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Car8-201ENSMUST00000066674 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Sox2ot-210ENSMUST00000197697 2533 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Dusp18-202ENSMUST00000109996 2685 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Zswim3-201ENSMUST00000052107 2708 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Mir449b-201ENSMUST00000104833 80 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm11930-201ENSMUST00000117788 190 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm12203-201ENSMUST00000118235 598 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm12209-201ENSMUST00000120089 596 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm24990-201ENSMUST00000157406 323 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm27203-201ENSMUST00000183677 307 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm31326-201ENSMUST00000191856 1048 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm37277-201ENSMUST00000194052 1111 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm10459-201ENSMUST00000202708 1155 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm7940-201ENSMUST00000218195 769 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm9111-201ENSMUST00000219394 709 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm9899-201ENSMUST00000065519 555 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm9115-201ENSMUST00000120192 1348 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm16287-201ENSMUST00000097827 2324 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm42847-201ENSMUST00000201732 2553 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Rnasel-201ENSMUST00000086209 2938 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gm42895-201ENSMUST00000200761 2996 ntBASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Gm3880A0A1B0GSB3 Taf12-201ENSMUST00000030731 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Gm3880A0A1B0GSB3 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Gm3880A0A1B0GSB3 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC4.84□□□□□ -1.63
Gm3880A0A1B0GSB3 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Gm3880A0A1B0GSB3 Smim7-203ENSMUST00000167290 2892 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Gm3880A0A1B0GSB3 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms