Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm25723-201ENSMUST00000104530 126 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Fam220-ps-201ENSMUST00000116535 783 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm24180-201ENSMUST00000179961 110 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm29617-201ENSMUST00000185730 610 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Spin3-ps-201ENSMUST00000192825 770 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm2328-201ENSMUST00000193525 535 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.46□□□□□ -0.73
Smarcd2Q99JR8 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Gm43585-201ENSMUST00000199375 1403 ntBASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd2Q99JR8 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm45728-201ENSMUST00000211475 2979 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm23129-201ENSMUST00000104259 132 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm14108-201ENSMUST00000122234 494 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm24352-201ENSMUST00000158966 125 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm17147-201ENSMUST00000164176 432 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm4398-201ENSMUST00000182698 992 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Ighv1-86-201ENSMUST00000200562 353 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm44139-201ENSMUST00000204903 373 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm19121-201ENSMUST00000215720 1022 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 AC161763.1-201ENSMUST00000227063 168 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Krtap6-3-201ENSMUST00000079151 444 ntBASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms