Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Als2cr12-201ENSMUST00000055313 1540 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm15423-201ENSMUST00000150600 1430 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm23659-201ENSMUST00000102245 110 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm11962-201ENSMUST00000145746 255 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm26046-201ENSMUST00000157312 166 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm23820-201ENSMUST00000158450 300 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm8893-201ENSMUST00000172146 1242 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm20844-201ENSMUST00000186101 654 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm21832-201ENSMUST00000186439 691 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm20921-201ENSMUST00000188265 652 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm21573-201ENSMUST00000190112 691 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm8925-201ENSMUST00000197212 763 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Tubb3-202ENSMUST00000212743 776 ntTSL 3 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm14666-201ENSMUST00000121121 843 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 1810019D21Rik-203ENSMUST00000145343 984 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm5575-201ENSMUST00000190879 398 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm37141-201ENSMUST00000191938 422 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 CT009546.3-201ENSMUST00000220914 208 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 AC154640.1-204ENSMUST00000227105 648 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Spg11Q3UHA3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm16044-201ENSMUST00000118475 450 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Zfp978-202ENSMUST00000154154 1250 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm19815-201ENSMUST00000175818 335 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm8143-201ENSMUST00000203654 1186 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms