Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm43916-201ENSMUST00000205062 967 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm4607-201ENSMUST00000206649 577 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Swt1-201ENSMUST00000064771 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 AC122858.2-201ENSMUST00000228571 1362 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Gm13535-201ENSMUST00000118714 1884 ntBASIC8.45□□□□□ -1.06
Trim63Q38HM4 Ccser2-207ENSMUST00000182797 1482 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim63Q38HM4 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 AC160405.2-201ENSMUST00000219008 1987 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Map2k7-204ENSMUST00000110995 1558 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Cflar-201ENSMUST00000069333 3163 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Dgcr2-202ENSMUST00000066127 3790 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm11511-201ENSMUST00000118146 540 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm24990-201ENSMUST00000157406 323 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm27701-201ENSMUST00000184498 110 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Mir6977-201ENSMUST00000184960 64 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm7255-201ENSMUST00000187371 908 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm7891-201ENSMUST00000190284 843 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 1700069P05Rik-201ENSMUST00000204240 785 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm19144-201ENSMUST00000221921 1859 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Tars-201ENSMUST00000022849 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ebf1-201ENSMUST00000081265 5981 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.44□□□□□ -1.06
Trim63Q38HM4 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim63Q38HM4 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm35934-201ENSMUST00000213002 2494 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 1600029O15Rik-202ENSMUST00000179787 1809 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm38352-201ENSMUST00000194459 2557 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Rab6a-203ENSMUST00000107048 2617 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Synm-203ENSMUST00000207102 3388 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 AC155941.2-201ENSMUST00000218795 1861 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Lpar1-204ENSMUST00000107574 3437 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm14028-201ENSMUST00000117434 479 ntBASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim63Q38HM4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms