Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.83□□□□□ -0.36
Cacna1sQ02789 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.83□□□□□ -0.36
Cacna1sQ02789 Gm10398-201ENSMUST00000100826 397 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm12250-201ENSMUST00000119467 1274 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm13675-201ENSMUST00000120616 529 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm13710-201ENSMUST00000126679 818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm22282-201ENSMUST00000158524 312 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Rpl6l-201ENSMUST00000171120 871 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm7516-201ENSMUST00000186198 706 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm37678-201ENSMUST00000192908 1146 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm43572-201ENSMUST00000196494 519 ntTSL 2 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Htr2b-201ENSMUST00000027431 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Polr1e-201ENSMUST00000029999 1724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm14044-201ENSMUST00000117531 447 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm15355-201ENSMUST00000118929 285 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm15247-201ENSMUST00000124513 403 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm24298-201ENSMUST00000158299 60 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Mir1964-201ENSMUST00000158514 83 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Ang-202ENSMUST00000171688 728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm5435-201ENSMUST00000179295 1150 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm27913-201ENSMUST00000184473 173 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Slc35a4-205ENSMUST00000185899 312 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gm44331-201ENSMUST00000203217 388 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 4933400L20Rik-202ENSMUST00000211119 870 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Gzma-202ENSMUST00000224282 996 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 AC121997.1-201ENSMUST00000226423 793 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 AC140406.3-201ENSMUST00000227619 478 ntBASIC12.82□□□□□ -0.36
Cacna1sQ02789 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cacna1sQ02789 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cacna1sQ02789 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Celf2-213ENSMUST00000150624 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Cab39l-206ENSMUST00000225595 1380 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm11662-201ENSMUST00000121389 1193 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm24786-201ENSMUST00000157379 109 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm26834-201ENSMUST00000181815 950 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Mir7115-201ENSMUST00000184275 64 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Il18-204ENSMUST00000214117 860 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 AC154283.2-201ENSMUST00000228954 614 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Olfr1264-201ENSMUST00000099758 927 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Zfand1-201ENSMUST00000037839 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Sept2-215ENSMUST00000179353 3219 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cacna1sQ02789 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Gm18345-201ENSMUST00000200710 1390 ntBASIC12.81□□□□□ -0.36
Cacna1sQ02789 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms