Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.56□□□□□ -0.72
Ddx6P54823 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ddx6P54823 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ddx6P54823 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ddx6P54823 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ddx6P54823 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ddx6P54823 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ddx6P54823 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ddx6P54823 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ddx6P54823 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC10.55□□□□□ -0.72
Ddx6P54823 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC10.55□□□□□ -0.72
Ddx6P54823 Gm34248-201ENSMUST00000200027 474 ntBASIC10.55□□□□□ -0.72
Ddx6P54823 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.55□□□□□ -0.72
Ddx6P54823 Gm6353-201ENSMUST00000223234 1051 ntBASIC10.55□□□□□ -0.72
Ddx6P54823 AC123061.1-201ENSMUST00000228021 999 ntBASIC10.55□□□□□ -0.72
Ddx6P54823 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Gm10344-201ENSMUST00000193498 1419 ntBASIC10.55□□□□□ -0.72
Ddx6P54823 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Ddx6P54823 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ddx6P54823 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ddx6P54823 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ddx6P54823 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ddx6P54823 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC10.54□□□□□ -0.72
Ddx6P54823 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Ddx6P54823 Gm13197-201ENSMUST00000117204 225 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.54□□□□□ -0.72
Ddx6P54823 Gm12736-201ENSMUST00000119330 236 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC10.54□□□□□ -0.72
Ddx6P54823 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ddx6P54823 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.54□□□□□ -0.72
Ddx6P54823 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC10.54□□□□□ -0.72
Ddx6P54823 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Gm32111-201ENSMUST00000207689 846 ntBASIC10.54□□□□□ -0.72
Ddx6P54823 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.54□□□□□ -0.72
Ddx6P54823 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ddx6P54823 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms