Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Cdx2P43241 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cdx2P43241 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC9.85□□□□□ -0.83
Cdx2P43241 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm3355-201ENSMUST00000160079 487 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Gm6773-201ENSMUST00000182377 878 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Trav9n-1-201ENSMUST00000185224 339 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Gm44139-201ENSMUST00000204903 373 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm18621-201ENSMUST00000222677 679 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 AC140426.1-201ENSMUST00000227933 459 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm17541-201ENSMUST00000080062 525 ntBASIC9.85□□□□□ -0.83
Cdx2P43241 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Cdx2P43241 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Cdx2P43241 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cdx2P43241 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm42651-201ENSMUST00000199851 1339 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cdx2P43241 AC132833.1-202ENSMUST00000228875 1690 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.84□□□□□ -0.83
Cdx2P43241 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cdx2P43241 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm25723-201ENSMUST00000104530 126 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm5071-201ENSMUST00000104922 1035 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm14153-201ENSMUST00000119923 1139 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm22763-201ENSMUST00000158374 107 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm23916-201ENSMUST00000158484 399 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm15664-201ENSMUST00000160167 184 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cdx2P43241 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
Cdx2P43241 Gm5259-201ENSMUST00000191231 800 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm43066-201ENSMUST00000199589 1260 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm7664-201ENSMUST00000221988 745 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 AC163646.3-201ENSMUST00000228879 772 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cdx2P43241 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx2P43241 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC9.84□□□□□ -0.83
Cdx2P43241 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.84□□□□□ -0.83
Cdx2P43241 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms