Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smarcd2Q99JR8 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gm26356-201ENSMUST00000158217 283 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gm9273-201ENSMUST00000200606 715 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 AC151971.6-201ENSMUST00000216193 866 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Gm44547-201ENSMUST00000207793 1446 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Spata33-207ENSMUST00000212760 4074 ntBASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smarcd2Q99JR8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm12684-201ENSMUST00000118675 999 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Mir1896-201ENSMUST00000122641 81 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Scgb1b21-201ENSMUST00000170232 268 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm25694-201ENSMUST00000175448 282 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm28381-201ENSMUST00000188403 193 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm38145-201ENSMUST00000192319 693 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm44716-201ENSMUST00000209007 710 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 CT009713.3-201ENSMUST00000224987 1565 ntBASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smarcd2Q99JR8 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms