Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.77□□□□□ -0.84
Clrn1Q8K445 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Clrn1Q8K445 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gm7583-201ENSMUST00000182941 1005 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gm29543-201ENSMUST00000188138 967 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 AC154585.1-201ENSMUST00000218917 997 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Rps3a2-201ENSMUST00000074245 792 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Nln-205ENSMUST00000224945 2486 ntBASIC9.77□□□□□ -0.85
Clrn1Q8K445 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Clrn1Q8K445 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm25661-201ENSMUST00000157704 296 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm6686-201ENSMUST00000178455 258 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Mir6360-201ENSMUST00000184278 126 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm29157-201ENSMUST00000188753 612 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm8557-201ENSMUST00000220777 475 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 AC164556.1-201ENSMUST00000221318 751 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms