Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm5071-201ENSMUST00000104922 1035 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm14227-201ENSMUST00000119431 629 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm16480-201ENSMUST00000120439 832 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm25843-201ENSMUST00000122582 314 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm38321-201ENSMUST00000195053 235 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm36980-201ENSMUST00000195643 622 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm5845-201ENSMUST00000195812 796 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm9515-201ENSMUST00000200276 647 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm3889-201ENSMUST00000212467 612 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 CT025561.1-201ENSMUST00000214972 674 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptcd1Q8C2E4 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm16439-201ENSMUST00000100687 564 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm5801-201ENSMUST00000182247 780 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm9273-201ENSMUST00000200606 715 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 AC153936.1-201ENSMUST00000219874 395 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Zmym2-202ENSMUST00000223669 1281 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 CT571271.1-201ENSMUST00000227071 670 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptcd1Q8C2E4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms