Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm21013-201ENSMUST00000184952 1201 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm44451-201ENSMUST00000203767 483 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm5776-201ENSMUST00000122119 321 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm22282-201ENSMUST00000158524 312 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm26964-201ENSMUST00000182516 832 ntTSL 2 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Mir6921-201ENSMUST00000183719 80 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm8623-201ENSMUST00000071573 436 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm5397-201ENSMUST00000121081 1453 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Gm42527-201ENSMUST00000198173 1480 ntBASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Map2k7-204ENSMUST00000110995 1558 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Gm20501-202ENSMUST00000211303 2194 ntBASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.88
Spg11Q3UHA3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Myl12a-202ENSMUST00000123686 804 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 1700019N19Rik-202ENSMUST00000166692 983 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm29175-201ENSMUST00000189500 402 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Shisa5-204ENSMUST00000196954 843 ntTSL 3 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Olfr1393-201ENSMUST00000078932 936 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Dcstamp-204ENSMUST00000227792 1367 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm27941-201ENSMUST00000183418 142 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm28677-202ENSMUST00000186904 615 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Mir181c-201ENSMUST00000083549 89 ntBASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Defa22-201ENSMUST00000098897 419 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Spg11Q3UHA3 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms