Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ybx1P62960 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ybx1P62960 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Ybx1P62960 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Gm14853-201ENSMUST00000116081 549 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Gm8022-201ENSMUST00000191763 904 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 Gm19058-201ENSMUST00000192135 598 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.66□□□□□ -0.7
Ybx1P62960 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC10.66□□□□□ -0.7
Ybx1P62960 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ybx1P62960 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.66□□□□□ -0.7
Ybx1P62960 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.66□□□□□ -0.7
Ybx1P62960 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ybx1P62960 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ybx1P62960 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ybx1P62960 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 AC116596.1-201ENSMUST00000228112 1762 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ybx1P62960 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ybx1P62960 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm7781-201ENSMUST00000117258 788 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC10.65□□□□□ -0.7
Ybx1P62960 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Ybx1P62960 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm7672-201ENSMUST00000180915 872 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm30652-201ENSMUST00000199103 430 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Gm34248-201ENSMUST00000200027 474 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.65□□□□□ -0.7
Ybx1P62960 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm8991-201ENSMUST00000073014 1075 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Gm23458-201ENSMUST00000083257 169 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ybx1P62960 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ybx1P62960 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.65□□□□□ -0.7
Ybx1P62960 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ybx1P62960 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.65□□□□□ -0.71
Ybx1P62960 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC10.65□□□□□ -0.71
Ybx1P62960 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.65□□□□□ -0.71
Ybx1P62960 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ybx1P62960 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ybx1P62960 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC10.64□□□□□ -0.71
Ybx1P62960 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms