Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm23659-201ENSMUST00000102245 110 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm8310-201ENSMUST00000117526 1193 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm23927-202ENSMUST00000199928 216 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 AC167234.1-201ENSMUST00000219929 279 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 AC167202.2-201ENSMUST00000220155 296 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm25129-201ENSMUST00000082651 133 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm43585-201ENSMUST00000199375 1403 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccdc188F6WEU2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm9164-201ENSMUST00000118700 1014 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Rpl19-ps11-201ENSMUST00000122422 591 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm23820-201ENSMUST00000158450 300 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm3617-201ENSMUST00000173076 555 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Mir3093-201ENSMUST00000175247 87 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm6073-201ENSMUST00000198253 466 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm44778-201ENSMUST00000206447 668 ntTSL 3 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 BC043934-202ENSMUST00000185694 2356 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc188F6WEU2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Gm10113-201ENSMUST00000072437 3150 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ccdc188F6WEU2 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms