Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Gm43288-201ENSMUST00000197594 2628 ntBASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Rexo5-203ENSMUST00000106520 2492 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Hp1bp3-214ENSMUST00000165861 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd1lQ9CXF7 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Polr3f-202ENSMUST00000110017 1632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm5281-201ENSMUST00000197542 2134 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Cdkl5-201ENSMUST00000087104 3269 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm12950-201ENSMUST00000121683 417 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm5801-201ENSMUST00000182247 780 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm6069-201ENSMUST00000196501 463 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm30671-201ENSMUST00000214898 318 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm18515-201ENSMUST00000219755 797 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Olfr1328-201ENSMUST00000081960 944 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Nell1-202ENSMUST00000107603 2756 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Stx16-202ENSMUST00000087908 3865 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd1lQ9CXF7 Gm17816-201ENSMUST00000219991 2603 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Fbxw11-202ENSMUST00000093205 3938 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm37052-201ENSMUST00000194929 1831 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm7857-201ENSMUST00000117957 358 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm13914-201ENSMUST00000118202 991 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm6881-201ENSMUST00000121811 833 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm25554-201ENSMUST00000158075 113 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm9146-201ENSMUST00000182254 1006 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm5266-201ENSMUST00000187302 1162 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm18561-201ENSMUST00000206027 804 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 Gm6353-201ENSMUST00000223234 1051 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.59□□□□□ -0.55
Chd1lQ9CXF7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms