Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm22146-201ENSMUST00000157397 288 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm5311-201ENSMUST00000203518 709 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm45728-201ENSMUST00000211475 2979 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm7594-201ENSMUST00000218595 871 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 AC119177.2-201ENSMUST00000226699 629 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC10.68□□□□□ -0.7
Trub1Q8C0D0 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm12628-201ENSMUST00000122193 382 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm8194-201ENSMUST00000159783 859 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm16581-201ENSMUST00000160730 991 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm9162-201ENSMUST00000182081 991 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm5700-201ENSMUST00000191483 989 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm44420-201ENSMUST00000203669 490 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 AC156016.4-201ENSMUST00000227470 647 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm4604-201ENSMUST00000025040 390 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.67□□□□□ -0.7
Trub1Q8C0D0 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Gm24470-201ENSMUST00000104486 132 ntBASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Gm12733-201ENSMUST00000119871 767 ntBASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.66□□□□□ -0.7
Trub1Q8C0D0 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms