Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh19Q80TF3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm16209-201ENSMUST00000118457 627 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm8152-201ENSMUST00000120842 637 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm5395-201ENSMUST00000121650 915 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm10171-201ENSMUST00000126220 628 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm26368-201ENSMUST00000157826 118 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm38217-201ENSMUST00000194358 910 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm37688-201ENSMUST00000195195 465 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm5311-201ENSMUST00000203518 709 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm6518-201ENSMUST00000208450 342 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm10233-201ENSMUST00000089275 628 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm10238-201ENSMUST00000089689 408 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh19Q80TF3 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm23255-201ENSMUST00000102244 110 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm8482-201ENSMUST00000117972 471 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm13841-201ENSMUST00000118829 483 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm11449-201ENSMUST00000119175 476 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm5656-201ENSMUST00000171020 1096 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm22662-201ENSMUST00000175290 256 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm8210-201ENSMUST00000178557 483 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm15454-201ENSMUST00000179718 483 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Mir6953-201ENSMUST00000184745 68 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm29288-201ENSMUST00000191582 901 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm43553-201ENSMUST00000200900 685 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm6344-201ENSMUST00000075962 483 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms