Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Gm22341-201ENSMUST00000083775 129 ntBASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rc3h1Q4VGL6 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rc3h1Q4VGL6 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rc3h1Q4VGL6 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm22662-201ENSMUST00000175290 256 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm4705-201ENSMUST00000177415 354 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm10925-201ENSMUST00000189941 678 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm17983-201ENSMUST00000190766 594 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm2716-201ENSMUST00000212350 643 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rc3h1Q4VGL6 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 AC163296.2-201ENSMUST00000220177 1315 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm38280-201ENSMUST00000192610 158 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm44388-201ENSMUST00000204350 258 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Gm31941-201ENSMUST00000209689 350 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rc3h1Q4VGL6 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms