Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm43827-201ENSMUST00000200623 1390 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm6073-201ENSMUST00000198253 466 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm11567-201ENSMUST00000078442 1043 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm23973-201ENSMUST00000083320 321 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Gm43435-201ENSMUST00000199996 1438 ntBASIC9.55□□□□□ -0.88
Spg11Q3UHA3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 9130230L23Rik-203ENSMUST00000201351 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 AC159819.3-201ENSMUST00000216940 1837 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm24556-201ENSMUST00000104547 130 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm13303-201ENSMUST00000117125 1284 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm13254-201ENSMUST00000118295 654 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Rspo4os-201ENSMUST00000152229 1281 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm44978-201ENSMUST00000206635 317 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm45510-201ENSMUST00000210059 638 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 AC154548.2-201ENSMUST00000224621 469 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm15032-201ENSMUST00000118547 411 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm6500-201ENSMUST00000119412 451 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm29434-201ENSMUST00000187426 260 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm42696-201ENSMUST00000199859 1142 ntBASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Btbd7-201ENSMUST00000045652 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Spg11Q3UHA3 Ccnb1ip1-201ENSMUST00000095932 1509 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Spg11Q3UHA3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms