Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Ccnb1ip1-201ENSMUST00000095932 1509 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Rad54b-201ENSMUST00000070755 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Gm46992-201ENSMUST00000222120 1389 ntBASIC12.88□□□□□ -0.35
Cacna1sQ02789 Gpatch4-202ENSMUST00000166021 1768 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1sQ02789 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm12508-201ENSMUST00000121282 480 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm15942-201ENSMUST00000136305 810 ntTSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm29794-201ENSMUST00000218919 1247 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 4930448C13Rik-205ENSMUST00000221781 806 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Rgs6-201ENSMUST00000101234 1368 ntTSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm23659-201ENSMUST00000102245 110 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm14663-201ENSMUST00000118474 1153 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm25145-201ENSMUST00000177640 110 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm37976-201ENSMUST00000193827 345 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Gm22054-201ENSMUST00000083395 155 ntBASIC12.87□□□□□ -0.35
Cacna1sQ02789 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.87□□□□□ -0.35
Cacna1sQ02789 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Gm16063-201ENSMUST00000156235 1701 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 1700008N11Rik-201ENSMUST00000209848 636 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 AC123735.1-201ENSMUST00000227358 605 ntBASIC12.86□□□□□ -0.35
Cacna1sQ02789 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Sertad4-201ENSMUST00000016406 3090 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1sQ02789 Gm43435-201ENSMUST00000199996 1438 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms