Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC8.68□□□□□ -1.02
Npas1P97459 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC8.68□□□□□ -1.02
Npas1P97459 Cwc22-203ENSMUST00000111819 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Npas1P97459 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 AC133934.1-201ENSMUST00000223052 1761 ntBASIC8.68□□□□□ -1.02
Npas1P97459 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Npas1P97459 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC8.68□□□□□ -1.02
Npas1P97459 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC8.68□□□□□ -1.02
Npas1P97459 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
Npas1P97459 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 A230056P14Rik-201ENSMUST00000130189 2177 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC8.68□□□□□ -1.02
Npas1P97459 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Npas1P97459 Gm15455-201ENSMUST00000117459 2557 ntBASIC8.67□□□□□ -1.02
Npas1P97459 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Itgb6-201ENSMUST00000028348 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Npas1P97459 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Npas1P97459 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gm21998-201ENSMUST00000117552 1308 ntBASIC8.67□□□□□ -1.02
Npas1P97459 Gm13422-201ENSMUST00000118834 504 ntBASIC8.67□□□□□ -1.02
Npas1P97459 Gm12097-201ENSMUST00000121523 1414 ntBASIC8.67□□□□□ -1.02
Npas1P97459 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gm7666-201ENSMUST00000146631 819 ntBASIC8.67□□□□□ -1.02
Npas1P97459 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Npas1P97459 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gm22144-201ENSMUST00000157402 102 ntBASIC8.67□□□□□ -1.02
Npas1P97459 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gm38344-201ENSMUST00000195306 1353 ntBASIC8.67□□□□□ -1.02
Npas1P97459 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Gm18212-201ENSMUST00000211678 889 ntBASIC8.67□□□□□ -1.02
Npas1P97459 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC8.67□□□□□ -1.02
Npas1P97459 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 AC154176.2-201ENSMUST00000225376 6429 ntBASIC8.67□□□□□ -1.02
Npas1P97459 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Ces2c-201ENSMUST00000055052 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Npas1P97459 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Npas1P97459 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC8.67□□□□□ -1.02
Npas1P97459 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Npas1P97459 Gm44437-201ENSMUST00000203832 4038 ntBASIC8.66□□□□□ -1.02
Npas1P97459 Gm46218-202ENSMUST00000215520 1956 ntBASIC8.66□□□□□ -1.02
Npas1P97459 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.66□□□□□ -1.02
Npas1P97459 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC8.66□□□□□ -1.02
Npas1P97459 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Npas1P97459 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Npas1P97459 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Npas1P97459 Gm5308-201ENSMUST00000196752 1354 ntBASIC8.66□□□□□ -1.02
Npas1P97459 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms