Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm27316-201ENSMUST00000184884 277 ntBASIC10.24□□□□□ -0.77
Cd9P40240 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC10.24□□□□□ -0.77
Cd9P40240 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm18463-201ENSMUST00000207258 474 ntBASIC10.24□□□□□ -0.77
Cd9P40240 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm18460-201ENSMUST00000208088 464 ntBASIC10.24□□□□□ -0.77
Cd9P40240 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Gm8446-201ENSMUST00000188834 2712 ntBASIC10.24□□□□□ -0.77
Cd9P40240 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.24□□□□□ -0.77
Cd9P40240 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC10.24□□□□□ -0.77
Cd9P40240 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cd9P40240 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC10.23□□□□□ -0.77
Cd9P40240 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.23□□□□□ -0.77
Cd9P40240 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm6441-201ENSMUST00000120983 696 ntBASIC10.23□□□□□ -0.77
Cd9P40240 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm24352-201ENSMUST00000158966 125 ntBASIC10.23□□□□□ -0.77
Cd9P40240 Gm8194-201ENSMUST00000159783 859 ntBASIC10.23□□□□□ -0.77
Cd9P40240 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.23□□□□□ -0.77
Cd9P40240 Gm27833-201ENSMUST00000184285 124 ntBASIC10.23□□□□□ -0.77
Cd9P40240 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cd9P40240 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms