Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
B020004C17RikJ3QP07 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm13361-201ENSMUST00000119977 1431 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 AC125351.1-201ENSMUST00000221438 2223 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm14834-201ENSMUST00000119416 795 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm14227-201ENSMUST00000119431 629 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm13413-201ENSMUST00000120953 602 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Mir1896-201ENSMUST00000122641 81 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm23555-201ENSMUST00000157815 135 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm22009-201ENSMUST00000158792 343 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm15664-201ENSMUST00000160167 184 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm44936-201ENSMUST00000207324 735 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm6378-201ENSMUST00000084199 444 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
B020004C17RikJ3QP07 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm14323-201ENSMUST00000122418 627 ntBASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm25426-201ENSMUST00000157606 170 ntBASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm3534-201ENSMUST00000182522 1001 ntBASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
B020004C17RikJ3QP07 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms