Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Golgb1-201ENSMUST00000023534 498 ntBASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb2S4R1M3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.84■□□□□ 0.77
H2afb2S4R1M3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
H2afb2S4R1M3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.84■□□□□ 0.77
H2afb2S4R1M3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.84■□□□□ 0.77
H2afb2S4R1M3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb2S4R1M3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb2S4R1M3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.83■□□□□ 0.77
H2afb2S4R1M3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb2S4R1M3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb2S4R1M3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.83■□□□□ 0.76
H2afb2S4R1M3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
H2afb2S4R1M3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
H2afb2S4R1M3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb2S4R1M3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb2S4R1M3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afb2S4R1M3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H2afb2S4R1M3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.81■□□□□ 0.76
H2afb2S4R1M3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afb2S4R1M3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afb2S4R1M3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.8■□□□□ 0.76
H2afb2S4R1M3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
H2afb2S4R1M3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb2S4R1M3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
H2afb2S4R1M3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb2S4R1M3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb2S4R1M3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb2S4R1M3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb2S4R1M3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2afb2S4R1M3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2afb2S4R1M3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.77■□□□□ 0.76
H2afb2S4R1M3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2afb2S4R1M3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2afb2S4R1M3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Gm9847-201ENSMUST00000052528 599 ntBASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb2S4R1M3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb2S4R1M3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb2S4R1M3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb2S4R1M3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb2S4R1M3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
H2afb2S4R1M3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms