Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx9Q9WUH2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx9Q9WUH2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx9Q9WUH2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.91■□□□□ 0.62
Lhx9Q9WUH2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Gm26833-201ENSMUST00000180899 440 ntBASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lhx9Q9WUH2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Gm5874-201ENSMUST00000096101 508 ntBASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lhx9Q9WUH2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx9Q9WUH2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx9Q9WUH2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx9Q9WUH2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms