Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn8aQ9WTU3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn8aQ9WTU3 Gm43060-201ENSMUST00000200621 289 ntBASIC20.17■□□□□ 0.82
Scn8aQ9WTU3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.17■□□□□ 0.82
Scn8aQ9WTU3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn8aQ9WTU3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn8aQ9WTU3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn8aQ9WTU3 Gm10493-201ENSMUST00000097270 612 ntBASIC20.16■□□□□ 0.82
Scn8aQ9WTU3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn8aQ9WTU3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn8aQ9WTU3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn8aQ9WTU3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn8aQ9WTU3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.14■□□□□ 0.82
Scn8aQ9WTU3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Scn8aQ9WTU3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn8aQ9WTU3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn8aQ9WTU3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn8aQ9WTU3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn8aQ9WTU3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Scn8aQ9WTU3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Scn8aQ9WTU3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Scn8aQ9WTU3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn8aQ9WTU3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn8aQ9WTU3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn8aQ9WTU3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Scn8aQ9WTU3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn8aQ9WTU3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn8aQ9WTU3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn8aQ9WTU3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.08■□□□□ 0.81
Scn8aQ9WTU3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.08■□□□□ 0.81
Scn8aQ9WTU3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn8aQ9WTU3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn8aQ9WTU3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Scn8aQ9WTU3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn8aQ9WTU3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Scn8aQ9WTU3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn8aQ9WTU3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms