Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Tlr4Q9QUK6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.47■□□□□ 0.71
Tlr4Q9QUK6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tlr4Q9QUK6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.45■□□□□ 0.7
Tlr4Q9QUK6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Smad6-203ENSMUST00000179458 273 ntBASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr4Q9QUK6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr4Q9QUK6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Gm43060-201ENSMUST00000200621 289 ntBASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr4Q9QUK6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr4Q9QUK6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.4■□□□□ 0.7
Tlr4Q9QUK6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlr4Q9QUK6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlr4Q9QUK6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Tlr4Q9QUK6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tlr4Q9QUK6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr4Q9QUK6 Gm40848-201ENSMUST00000221998 324 ntBASIC19.39■□□□□ 0.69
Tlr4Q9QUK6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tlr4Q9QUK6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr4Q9QUK6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr4Q9QUK6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.38■□□□□ 0.69
Tlr4Q9QUK6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tlr4Q9QUK6 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.38■□□□□ 0.69
Tlr4Q9QUK6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms