Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Gm10399-202ENSMUST00000202768 748 ntBASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcl1Q9JJT0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Gm7417-201ENSMUST00000192950 473 ntBASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Gm40881-201ENSMUST00000223397 166 ntBASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rcl1Q9JJT0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcl1Q9JJT0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcl1Q9JJT0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rcl1Q9JJT0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rcl1Q9JJT0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.58■□□□□ 0.25
Rcl1Q9JJT0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rcl1Q9JJT0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rcl1Q9JJT0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rcl1Q9JJT0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rcl1Q9JJT0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rcl1Q9JJT0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms