Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tubb3Q9ERD7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb3Q9ERD7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tubb3Q9ERD7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Tubb3Q9ERD7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb3Q9ERD7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb3Q9ERD7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb3Q9ERD7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tubb3Q9ERD7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tubb3Q9ERD7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tubb3Q9ERD7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.64■□□□□ 0.73
Tubb3Q9ERD7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
Tubb3Q9ERD7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb3Q9ERD7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.64■□□□□ 0.73
Tubb3Q9ERD7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb3Q9ERD7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb3Q9ERD7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubb3Q9ERD7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubb3Q9ERD7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubb3Q9ERD7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms