Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr9Q9EQU3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr9Q9EQU3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr9Q9EQU3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.66■□□□□ 0.9
Tlr9Q9EQU3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr9Q9EQU3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tlr9Q9EQU3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tlr9Q9EQU3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tlr9Q9EQU3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr9Q9EQU3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr9Q9EQU3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr9Q9EQU3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr9Q9EQU3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr9Q9EQU3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tlr9Q9EQU3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Tlr9Q9EQU3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr9Q9EQU3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr9Q9EQU3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr9Q9EQU3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr9Q9EQU3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tlr9Q9EQU3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr9Q9EQU3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr9Q9EQU3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms