Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne8Q9DC53 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.75■□□□□ 0.91
Cpne8Q9DC53 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne8Q9DC53 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne8Q9DC53 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne8Q9DC53 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne8Q9DC53 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cpne8Q9DC53 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne8Q9DC53 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne8Q9DC53 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne8Q9DC53 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne8Q9DC53 Mir6236-201ENSMUST00000184437 123 ntBASIC20.73■□□□□ 0.91
Cpne8Q9DC53 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.73■□□□□ 0.91
Cpne8Q9DC53 Rps24-207ENSMUST00000224568 714 ntBASIC20.73■□□□□ 0.91
Cpne8Q9DC53 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.73■□□□□ 0.91
Cpne8Q9DC53 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cpne8Q9DC53 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne8Q9DC53 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cpne8Q9DC53 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne8Q9DC53 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne8Q9DC53 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.69■□□□□ 0.9
Cpne8Q9DC53 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne8Q9DC53 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Cpne8Q9DC53 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne8Q9DC53 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne8Q9DC53 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne8Q9DC53 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne8Q9DC53 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cpne8Q9DC53 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.66■□□□□ 0.9
Cpne8Q9DC53 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne8Q9DC53 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpne8Q9DC53 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
Cpne8Q9DC53 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cpne8Q9DC53 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpne8Q9DC53 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms