Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Csnk1dQ9DC28 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Csnk1dQ9DC28 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.74■□□□□ 0.75
Csnk1dQ9DC28 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.73■□□□□ 0.75
Csnk1dQ9DC28 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Csnk1dQ9DC28 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Csnk1dQ9DC28 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Gm11421-201ENSMUST00000122124 294 ntBASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Csnk1dQ9DC28 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Csnk1dQ9DC28 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Gm43060-201ENSMUST00000200621 289 ntBASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Csnk1dQ9DC28 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 AA386476-201ENSMUST00000098781 1665 ntBASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Csnk1dQ9DC28 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Csnk1dQ9DC28 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Csnk1dQ9DC28 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms