Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp8Q9DB85 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rrp8Q9DB85 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rrp8Q9DB85 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rrp8Q9DB85 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rrp8Q9DB85 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rrp8Q9DB85 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rrp8Q9DB85 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.42■□□□□ 0.7
Rrp8Q9DB85 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rrp8Q9DB85 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.41■□□□□ 0.7
Rrp8Q9DB85 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Gm7514-201ENSMUST00000209475 934 ntBASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rrp8Q9DB85 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Rrp8Q9DB85 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp8Q9DB85 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.39■□□□□ 0.69
Rrp8Q9DB85 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Rrp8Q9DB85 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rrp8Q9DB85 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp8Q9DB85 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rrp8Q9DB85 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp8Q9DB85 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rrp8Q9DB85 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp8Q9DB85 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rrp8Q9DB85 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms