Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp2aQ9DB34 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp2aQ9DB34 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp2aQ9DB34 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp2aQ9DB34 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp2aQ9DB34 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp2aQ9DB34 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp2aQ9DB34 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Chmp2aQ9DB34 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2aQ9DB34 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2aQ9DB34 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp2aQ9DB34 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp2aQ9DB34 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp2aQ9DB34 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp2aQ9DB34 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp2aQ9DB34 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Chmp2aQ9DB34 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.58■□□□□ 0.89
Chmp2aQ9DB34 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp2aQ9DB34 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp2aQ9DB34 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp2aQ9DB34 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Chmp2aQ9DB34 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp2aQ9DB34 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Mir7075-201ENSMUST00000184187 82 ntBASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp2aQ9DB34 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp2aQ9DB34 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms