Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Smad6-203ENSMUST00000179458 273 ntBASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rita1Q9D1H0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rita1Q9D1H0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.33■□□□□ 0.53
Rita1Q9D1H0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rita1Q9D1H0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Rita1Q9D1H0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rita1Q9D1H0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rita1Q9D1H0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rita1Q9D1H0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rita1Q9D1H0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rita1Q9D1H0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rita1Q9D1H0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Gm26833-201ENSMUST00000180899 440 ntBASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rita1Q9D1H0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rita1Q9D1H0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.29■□□□□ 0.52
Rita1Q9D1H0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rita1Q9D1H0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rita1Q9D1H0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rita1Q9D1H0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rita1Q9D1H0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rita1Q9D1H0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.26■□□□□ 0.51
Rita1Q9D1H0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.26■□□□□ 0.51
Rita1Q9D1H0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rita1Q9D1H0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rita1Q9D1H0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rita1Q9D1H0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rita1Q9D1H0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rita1Q9D1H0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms