Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chaf1bQ9D0N7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Chaf1bQ9D0N7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1bQ9D0N7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chaf1bQ9D0N7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chaf1bQ9D0N7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chaf1bQ9D0N7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chaf1bQ9D0N7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Chaf1bQ9D0N7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chaf1bQ9D0N7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chaf1bQ9D0N7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.52■□□□□ 0.56
Chaf1bQ9D0N7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chaf1bQ9D0N7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chaf1bQ9D0N7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chaf1bQ9D0N7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Chaf1bQ9D0N7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chaf1bQ9D0N7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chaf1bQ9D0N7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms