Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc5Q9D0F6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfc5Q9D0F6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfc5Q9D0F6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfc5Q9D0F6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc5Q9D0F6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Rfc5Q9D0F6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc5Q9D0F6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfc5Q9D0F6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc5Q9D0F6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfc5Q9D0F6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfc5Q9D0F6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc5Q9D0F6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Gm43060-201ENSMUST00000200621 289 ntBASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc5Q9D0F6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc5Q9D0F6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc5Q9D0F6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.52■□□□□ 0.88
Rfc5Q9D0F6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc5Q9D0F6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.52■□□□□ 0.88
Rfc5Q9D0F6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc5Q9D0F6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc5Q9D0F6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc5Q9D0F6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Rfc5Q9D0F6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Rfc5Q9D0F6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfc5Q9D0F6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms