Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.99■□□□□ 0.63
Khdc3Q9CWU5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc3Q9CWU5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.99■□□□□ 0.63
Khdc3Q9CWU5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.99■□□□□ 0.63
Khdc3Q9CWU5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.99■□□□□ 0.63
Khdc3Q9CWU5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc3Q9CWU5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc3Q9CWU5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Mir6236-201ENSMUST00000184437 123 ntBASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.96■□□□□ 0.63
Khdc3Q9CWU5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc3Q9CWU5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.95■□□□□ 0.62
Khdc3Q9CWU5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Khdc3Q9CWU5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc3Q9CWU5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc3Q9CWU5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc3Q9CWU5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Golgb1-201ENSMUST00000023534 498 ntBASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc3Q9CWU5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Gm12922-201ENSMUST00000120626 809 ntBASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Khdc3Q9CWU5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc3Q9CWU5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Khdc3Q9CWU5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Khdc3Q9CWU5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms