Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldnd1Q9CQX5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Gm13148-201ENSMUST00000118892 745 ntBASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Gm13168-201ENSMUST00000121771 632 ntBASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldnd1Q9CQX5 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldnd1Q9CQX5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldnd1Q9CQX5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Gm7290-201ENSMUST00000104990 617 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Gm12918-201ENSMUST00000120234 636 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Gm15710-201ENSMUST00000121821 636 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Gm5075-201ENSMUST00000196916 622 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.44■□□□□ 0.86
Cldnd1Q9CQX5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd1Q9CQX5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.43■□□□□ 0.86
Cldnd1Q9CQX5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd1Q9CQX5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cldnd1Q9CQX5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldnd1Q9CQX5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cldnd1Q9CQX5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldnd1Q9CQX5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.41■□□□□ 0.86
Cldnd1Q9CQX5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Gm10812-201ENSMUST00000099864 546 ntBASIC20.4■□□□□ 0.86
Cldnd1Q9CQX5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cldnd1Q9CQX5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldnd1Q9CQX5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldnd1Q9CQX5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.39■□□□□ 0.86
Cldnd1Q9CQX5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 Gm20049-201ENSMUST00000219950 730 ntBASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.39■□□□□ 0.85
Cldnd1Q9CQX5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms