Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retreg3Q9CQV4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Retreg3Q9CQV4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retreg3Q9CQV4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Gm43137-201ENSMUST00000198052 594 ntBASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Retreg3Q9CQV4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retreg3Q9CQV4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.92■□□□□ 0.78
Retreg3Q9CQV4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Gm42790-201ENSMUST00000201268 969 ntBASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.91■□□□□ 0.78
Retreg3Q9CQV4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg3Q9CQV4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Gm12251-201ENSMUST00000117893 792 ntBASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retreg3Q9CQV4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg3Q9CQV4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg3Q9CQV4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg3Q9CQV4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Gm18284-201ENSMUST00000172604 624 ntBASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg3Q9CQV4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms