Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
H2afb1Q9CQ70 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb1Q9CQ70 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb1Q9CQ70 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb1Q9CQ70 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb1Q9CQ70 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H2afb1Q9CQ70 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Gm9959-201ENSMUST00000068277 390 ntBASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.17■□□□□ 0.18
H2afb1Q9CQ70 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Gm22238-201ENSMUST00000175222 88 ntBASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1Q9CQ70 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Golph3-202ENSMUST00000226517 2359 ntBASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.15■□□□□ 0.18
H2afb1Q9CQ70 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
H2afb1Q9CQ70 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1Q9CQ70 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms