Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Gm43566-201ENSMUST00000196851 808 ntBASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Gm5812-201ENSMUST00000061073 957 ntBASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim8Q99PJ2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim8Q99PJ2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim8Q99PJ2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim8Q99PJ2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim8Q99PJ2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim8Q99PJ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim8Q99PJ2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.33■□□□□ 0.68
Trim8Q99PJ2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim8Q99PJ2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim8Q99PJ2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim8Q99PJ2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim8Q99PJ2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim8Q99PJ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim8Q99PJ2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.31■□□□□ 0.68
Trim8Q99PJ2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim8Q99PJ2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim8Q99PJ2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim8Q99PJ2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim8Q99PJ2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim8Q99PJ2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim8Q99PJ2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim8Q99PJ2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim8Q99PJ2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim8Q99PJ2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim8Q99PJ2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim8Q99PJ2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim8Q99PJ2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim8Q99PJ2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms