Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.25■□□□□ 0.67
Msh4Q99MT2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.25■□□□□ 0.67
Msh4Q99MT2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh4Q99MT2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.24■□□□□ 0.67
Msh4Q99MT2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh4Q99MT2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Msh4Q99MT2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.23■□□□□ 0.67
Msh4Q99MT2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Msh4Q99MT2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh4Q99MT2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh4Q99MT2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh4Q99MT2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh4Q99MT2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh4Q99MT2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.21■□□□□ 0.67
Msh4Q99MT2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.21■□□□□ 0.67
Msh4Q99MT2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.21■□□□□ 0.67
Msh4Q99MT2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh4Q99MT2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.2■□□□□ 0.66
Msh4Q99MT2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh4Q99MT2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh4Q99MT2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Msh4Q99MT2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.17■□□□□ 0.66
Msh4Q99MT2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms