Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Golph3-202ENSMUST00000226517 2359 ntBASIC18.67■□□□□ 0.58
Nkd1Q99MH6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkd1Q99MH6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Gm7143-201ENSMUST00000222811 859 ntBASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkd1Q99MH6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkd1Q99MH6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkd1Q99MH6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nkd1Q99MH6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nkd1Q99MH6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nkd1Q99MH6 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.63■□□□□ 0.57
Nkd1Q99MH6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkd1Q99MH6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkd1Q99MH6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nkd1Q99MH6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkd1Q99MH6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkd1Q99MH6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkd1Q99MH6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Gm15820-201ENSMUST00000201566 728 ntBASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkd1Q99MH6 Iqck-206ENSMUST00000208658 2891 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms