Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.72■□□□□ 0.75
Homer3Q99JP6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Homer3Q99JP6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Homer3Q99JP6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Homer3Q99JP6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Gm43566-201ENSMUST00000196851 808 ntBASIC19.71■□□□□ 0.75
Homer3Q99JP6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Homer3Q99JP6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Homer3Q99JP6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.7■□□□□ 0.74
Homer3Q99JP6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.7■□□□□ 0.74
Homer3Q99JP6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.7■□□□□ 0.74
Homer3Q99JP6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Homer3Q99JP6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Homer3Q99JP6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Homer3Q99JP6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Homer3Q99JP6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Homer3Q99JP6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Homer3Q99JP6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.68■□□□□ 0.74
Homer3Q99JP6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Homer3Q99JP6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Homer3Q99JP6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Homer3Q99JP6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Homer3Q99JP6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Homer3Q99JP6 Gm13238-201ENSMUST00000117655 780 ntBASIC19.65■□□□□ 0.74
Homer3Q99JP6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.65■□□□□ 0.74
Homer3Q99JP6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Homer3Q99JP6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Homer3Q99JP6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Homer3Q99JP6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Homer3Q99JP6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Homer3Q99JP6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Homer3Q99JP6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Homer3Q99JP6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Homer3Q99JP6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Homer3Q99JP6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Homer3Q99JP6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.64■□□□□ 0.73
Homer3Q99JP6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.64■□□□□ 0.73
Homer3Q99JP6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.64■□□□□ 0.73
Homer3Q99JP6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.64■□□□□ 0.73
Homer3Q99JP6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Homer3Q99JP6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Homer3Q99JP6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Homer3Q99JP6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.63■□□□□ 0.73
Homer3Q99JP6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Homer3Q99JP6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Gm10232-201ENSMUST00000089221 720 ntBASIC19.62■□□□□ 0.73
Homer3Q99JP6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Homer3Q99JP6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms