Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk9Q99J95 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk9Q99J95 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk9Q99J95 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk9Q99J95 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cdk9Q99J95 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk9Q99J95 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
Cdk9Q99J95 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.85■□□□□ 0.77
Cdk9Q99J95 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk9Q99J95 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk9Q99J95 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk9Q99J95 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk9Q99J95 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk9Q99J95 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk9Q99J95 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk9Q99J95 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk9Q99J95 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk9Q99J95 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdk9Q99J95 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdk9Q99J95 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdk9Q99J95 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk9Q99J95 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk9Q99J95 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk9Q99J95 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk9Q99J95 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdk9Q99J95 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk9Q99J95 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cdk9Q99J95 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk9Q99J95 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.78■□□□□ 0.76
Cdk9Q99J95 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk9Q99J95 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cdk9Q99J95 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cdk9Q99J95 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.77■□□□□ 0.76
Cdk9Q99J95 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk9Q99J95 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk9Q99J95 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdk9Q99J95 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Cdk9Q99J95 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms