Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb20Q91XZ9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb20Q91XZ9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.02■□□□□ 0.63
Pcdhb20Q91XZ9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb20Q91XZ9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb20Q91XZ9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb20Q91XZ9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhb20Q91XZ9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb20Q91XZ9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Smad6-203ENSMUST00000179458 273 ntBASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdhb20Q91XZ9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb20Q91XZ9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb20Q91XZ9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Gm19087-201ENSMUST00000191430 946 ntBASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb20Q91XZ9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb20Q91XZ9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb20Q91XZ9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms