Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga9Q91XX9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga9Q91XX9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga9Q91XX9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga9Q91XX9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga9Q91XX9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhga9Q91XX9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Pcdhga9Q91XX9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.58■□□□□ 0.72
Pcdhga9Q91XX9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhga9Q91XX9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhga9Q91XX9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhga9Q91XX9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhga9Q91XX9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhga9Q91XX9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga9Q91XX9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga9Q91XX9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga9Q91XX9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhga9Q91XX9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga9Q91XX9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms