Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgb1Q91XX8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Smad6-203ENSMUST00000179458 273 ntBASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhgb1Q91XX8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb1Q91XX8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb1Q91XX8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb1Q91XX8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb1Q91XX8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb1Q91XX8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb1Q91XX8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb1Q91XX8 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.56■□□□□ 0.88
Pcdhgb1Q91XX8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb1Q91XX8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.56■□□□□ 0.88
Pcdhgb1Q91XX8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhgb1Q91XX8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb1Q91XX8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb1Q91XX8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb1Q91XX8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb1Q91XX8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb1Q91XX8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb1Q91XX8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb1Q91XX8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb1Q91XX8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgb1Q91XX8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Gm5874-201ENSMUST00000096101 508 ntBASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhgb1Q91XX8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgb1Q91XX8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgb1Q91XX8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgb1Q91XX8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgb1Q91XX8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgb1Q91XX8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgb1Q91XX8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms