Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm43137-201ENSMUST00000198052 594 ntBASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb11Q91UZ8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb11Q91UZ8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb11Q91UZ8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb11Q91UZ8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Gm12821-201ENSMUST00000120022 600 ntBASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Gm27454-201ENSMUST00000185090 204 ntBASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb11Q91UZ8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb11Q91UZ8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb11Q91UZ8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pcdhb11Q91UZ8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.27■□□□□ 0.83
Pcdhb11Q91UZ8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb11Q91UZ8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb11Q91UZ8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb11Q91UZ8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb11Q91UZ8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb11Q91UZ8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb11Q91UZ8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms