Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TraipQ8VIG6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TraipQ8VIG6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TraipQ8VIG6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TraipQ8VIG6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TraipQ8VIG6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TraipQ8VIG6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TraipQ8VIG6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TraipQ8VIG6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TraipQ8VIG6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TraipQ8VIG6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TraipQ8VIG6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TraipQ8VIG6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.14■□□□□ 0.97
TraipQ8VIG6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
TraipQ8VIG6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TraipQ8VIG6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.13■□□□□ 0.97
TraipQ8VIG6 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.13■□□□□ 0.97
TraipQ8VIG6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Gm42569-201ENSMUST00000200539 472 ntBASIC21.13■□□□□ 0.97
TraipQ8VIG6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TraipQ8VIG6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TraipQ8VIG6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
TraipQ8VIG6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.12■□□□□ 0.97
TraipQ8VIG6 Gm18671-201ENSMUST00000214826 683 ntBASIC21.12■□□□□ 0.97
TraipQ8VIG6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.12■□□□□ 0.97
TraipQ8VIG6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.12■□□□□ 0.97
TraipQ8VIG6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TraipQ8VIG6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TraipQ8VIG6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TraipQ8VIG6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.11■□□□□ 0.97
TraipQ8VIG6 AV356131-201ENSMUST00000206201 750 ntBASIC21.11■□□□□ 0.97
TraipQ8VIG6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TraipQ8VIG6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.1■□□□□ 0.97
TraipQ8VIG6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TraipQ8VIG6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TraipQ8VIG6 Gm42778-201ENSMUST00000199644 553 ntBASIC21.09■□□□□ 0.97
TraipQ8VIG6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TraipQ8VIG6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TraipQ8VIG6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TraipQ8VIG6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TraipQ8VIG6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TraipQ8VIG6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TraipQ8VIG6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TraipQ8VIG6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TraipQ8VIG6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TraipQ8VIG6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms